Informatics and standards for nanomedicine technology
Identifieur interne : 000783 ( Main/Exploration ); précédent : 000782; suivant : 000784Informatics and standards for nanomedicine technology
Auteurs : Dennis G. Thomas [États-Unis] ; Fred Klaessig [États-Unis] ; Stacey L. Harper [États-Unis] ; Martin Fritts [États-Unis] ; Mark D. Hoover [États-Unis] ; Sharon Gaheen [États-Unis] ; Todd H. Stokes [États-Unis] ; Rebecca Reznik-Zellen [États-Unis] ; Elaine T. Freund [États-Unis] ; Juli D. Klemm [États-Unis] ; David S. Paik [États-Unis] ; Nathan A. Baker [États-Unis]Source :
- Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology [ 1939-5116 ] ; 2011-09.
Abstract
There are several issues to be addressed concerning the management and effective use of information (or data), generated from nanotechnology studies in biomedical research and medicine. These data are large in volume, diverse in content, and are beset with gaps and ambiguities in the description and characterization of nanomaterials. In this work, we have reviewed three areas of nanomedicine informatics: information resources; taxonomies, controlled vocabularies, and ontologies; and information standards. Informatics methods and standards in each of these areas are critical for enabling collaboration; data sharing; unambiguous representation and interpretation of data; semantic (meaningful) search and integration of data; and for ensuring data quality, reliability, and reproducibility. In particular, we have considered four types of information standards in this article, which are standard characterization protocols, common terminology standards, minimum information standards, and standard data communication (exchange) formats. Currently, because of gaps and ambiguities in the data, it is also difficult to apply computational methods and machine learning techniques to analyze, interpret, and recognize patterns in data that are high dimensional in nature, and also to relate variations in nanomaterial properties to variations in their chemical composition, synthesis, characterization protocols, and so on. Progress toward resolving the issues of information management in nanomedicine using informatics methods and standards discussed in this article will be essential to the rapidly growing field of nanomedicine informatics. WIREs Nanomed Nanobiotechnol 2011 3 511–532 DOI: 10.1002/wnan.152 This article is a U.S. Government work, and as such, is in the public domain in the United States of America. For further resources related to this article, please visit the WIREs website
Url:
- https://api.istex.fr/document/09E0B78E71F991922CDC72F45FADE35C3599DE98/fulltext/pdf
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3189420
DOI: 10.1002/wnan.152
Affiliations:
- États-Unis
- Californie, Géorgie (États-Unis), Maryland, Massachusetts, Oregon, Pennsylvanie, Virginie-Occidentale, Washington (État)
- Amherst (Massachusetts)
- Université du Massachusetts à Amherst
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Freund</name><affiliation wicri:level="2"><country xml:lang="fr">États-Unis</country><wicri:regionArea>3rd Millenium, Inc., Waltham, MA</wicri:regionArea><placeName><region type="state">Massachusetts</region></placeName></affiliation></author><author><name sortKey="Klemm, Juli D" sort="Klemm, Juli D" uniqKey="Klemm J" first="Juli D." last="Klemm">Juli D. Klemm</name><affiliation wicri:level="2"><country xml:lang="fr">États-Unis</country><wicri:regionArea>Center for Biomedical Informatics and Information Technology, National Cancer Institute, Bethesda, MD</wicri:regionArea><placeName><region type="state">Maryland</region></placeName></affiliation></author><author><name sortKey="Paik, David S" sort="Paik, David S" uniqKey="Paik D" first="David S." last="Paik">David S. 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Baker</name><affiliation wicri:level="2"><country xml:lang="fr">États-Unis</country><wicri:regionArea>Pacific Northwest National Laboratory, Richland, WA</wicri:regionArea><placeName><region type="state">Washington (État)</region></placeName></affiliation></author></analytic><monogr></monogr><series><title level="j">Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology</title><title level="j" type="abbrev">WIREs Nanomed Nanobiotechnol</title><idno type="ISSN">1939-5116</idno><idno type="eISSN">1939-0041</idno><imprint><publisher>John Wiley & Sons, Inc.</publisher><pubPlace>Hoboken, USA</pubPlace><date type="published" when="2011-09">2011-09</date><biblScope unit="volume">3</biblScope><biblScope unit="issue">5</biblScope><biblScope unit="page" from="511">511</biblScope><biblScope unit="page" to="532">532</biblScope></imprint><idno type="ISSN">1939-5116</idno></series><idno type="istex">09E0B78E71F991922CDC72F45FADE35C3599DE98</idno><idno type="DOI">10.1002/wnan.152</idno><idno type="ArticleID">WNAN152</idno></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">1939-5116</idno></seriesStmt></fileDesc><profileDesc><textClass></textClass><langUsage><language ident="en">en</language></langUsage></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">There are several issues to be addressed concerning the management and effective use of information (or data), generated from nanotechnology studies in biomedical research and medicine. These data are large in volume, diverse in content, and are beset with gaps and ambiguities in the description and characterization of nanomaterials. In this work, we have reviewed three areas of nanomedicine informatics: information resources; taxonomies, controlled vocabularies, and ontologies; and information standards. Informatics methods and standards in each of these areas are critical for enabling collaboration; data sharing; unambiguous representation and interpretation of data; semantic (meaningful) search and integration of data; and for ensuring data quality, reliability, and reproducibility. In particular, we have considered four types of information standards in this article, which are standard characterization protocols, common terminology standards, minimum information standards, and standard data communication (exchange) formats. Currently, because of gaps and ambiguities in the data, it is also difficult to apply computational methods and machine learning techniques to analyze, interpret, and recognize patterns in data that are high dimensional in nature, and also to relate variations in nanomaterial properties to variations in their chemical composition, synthesis, characterization protocols, and so on. Progress toward resolving the issues of information management in nanomedicine using informatics methods and standards discussed in this article will be essential to the rapidly growing field of nanomedicine informatics. WIREs Nanomed Nanobiotechnol 2011 3 511–532 DOI: 10.1002/wnan.152 This article is a U.S. Government work, and as such, is in the public domain in the United States of America. For further resources related to this article, please visit the WIREs website</div></front></TEI><affiliations><list><country><li>États-Unis</li></country><region><li>Californie</li><li>Géorgie (États-Unis)</li><li>Maryland</li><li>Massachusetts</li><li>Oregon</li><li>Pennsylvanie</li><li>Virginie-Occidentale</li><li>Washington (État)</li></region><settlement><li>Amherst (Massachusetts)</li></settlement><orgName><li>Université du Massachusetts à Amherst</li></orgName></list><tree><country name="États-Unis"><region name="Washington (État)"><name sortKey="Thomas, Dennis G" sort="Thomas, Dennis G" uniqKey="Thomas D" first="Dennis G." last="Thomas">Dennis G. Thomas</name></region><name sortKey="Baker, Nathan A" sort="Baker, Nathan A" uniqKey="Baker N" first="Nathan A." last="Baker">Nathan A. Baker</name><name sortKey="Freund, Elaine T" sort="Freund, Elaine T" uniqKey="Freund E" first="Elaine T." last="Freund">Elaine T. Freund</name><name sortKey="Fritts, Martin" sort="Fritts, Martin" uniqKey="Fritts M" first="Martin" last="Fritts">Martin Fritts</name><name sortKey="Gaheen, Sharon" sort="Gaheen, Sharon" uniqKey="Gaheen S" first="Sharon" last="Gaheen">Sharon Gaheen</name><name sortKey="Harper, Stacey L" sort="Harper, Stacey L" uniqKey="Harper S" first="Stacey L." last="Harper">Stacey L. Harper</name><name sortKey="Hoover, Mark D" sort="Hoover, Mark D" uniqKey="Hoover M" first="Mark D." last="Hoover">Mark D. Hoover</name><name sortKey="Klaessig, Fred" sort="Klaessig, Fred" uniqKey="Klaessig F" first="Fred" last="Klaessig">Fred Klaessig</name><name sortKey="Klemm, Juli D" sort="Klemm, Juli D" uniqKey="Klemm J" first="Juli D." last="Klemm">Juli D. Klemm</name><name sortKey="Paik, David S" sort="Paik, David S" uniqKey="Paik D" first="David S." last="Paik">David S. Paik</name><name sortKey="Reznik Ellen, Rebecca" sort="Reznik Ellen, Rebecca" uniqKey="Reznik Ellen R" first="Rebecca" last="Reznik-Zellen">Rebecca Reznik-Zellen</name><name sortKey="Stokes, Todd H" sort="Stokes, Todd H" uniqKey="Stokes T" first="Todd H." last="Stokes">Todd H. Stokes</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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